Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf1Q07802 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.27□□□□□ -0.44
Ebf1Q07802 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf1Q07802 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.27□□□□□ -0.44
Ebf1Q07802 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ebf1Q07802 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf1Q07802 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf1Q07802 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf1Q07802 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.27□□□□□ -0.44
Ebf1Q07802 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf1Q07802 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ebf1Q07802 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ebf1Q07802 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ebf1Q07802 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Ebf1Q07802 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ebf1Q07802 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.27□□□□□ -0.45
Ebf1Q07802 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ebf1Q07802 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ebf1Q07802 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm24231-201ENSMUST00000104315 133 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm7851-201ENSMUST00000117574 323 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm10051-201ENSMUST00000145209 414 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm25881-201ENSMUST00000157783 103 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm43058-201ENSMUST00000197645 625 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm1821-202ENSMUST00000227415 750 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.26□□□□□ -0.45
Ebf1Q07802 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ebf1Q07802 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Ebf1Q07802 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms