Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col9a2Q07643 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col9a2Q07643 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.08□□□□□ -0.32
Col9a2Q07643 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Gm13809-201ENSMUST00000117921 597 ntBASIC13.07□□□□□ -0.32
Col9a2Q07643 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Mir8115-201ENSMUST00000184992 119 ntBASIC13.07□□□□□ -0.32
Col9a2Q07643 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.07□□□□□ -0.32
Col9a2Q07643 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col9a2Q07643 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col9a2Q07643 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.06□□□□□ -0.32
Col9a2Q07643 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.06□□□□□ -0.32
Col9a2Q07643 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Gm11956-201ENSMUST00000119525 512 ntBASIC13.06□□□□□ -0.32
Col9a2Q07643 Gm14665-201ENSMUST00000122294 557 ntBASIC13.06□□□□□ -0.32
Col9a2Q07643 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Gm2965-201ENSMUST00000198365 343 ntBASIC13.06□□□□□ -0.32
Col9a2Q07643 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.06□□□□□ -0.32
Col9a2Q07643 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.06□□□□□ -0.32
Col9a2Q07643 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col9a2Q07643 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms