Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cntn3Q07409 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.69□□□□□ -0.38
Cntn3Q07409 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Cntn3Q07409 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cntn3Q07409 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.69□□□□□ -0.38
Cntn3Q07409 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cntn3Q07409 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cntn3Q07409 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn3Q07409 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cntn3Q07409 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.68□□□□□ -0.38
Cntn3Q07409 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cntn3Q07409 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cntn3Q07409 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Gm23949-201ENSMUST00000104027 127 ntBASIC12.68□□□□□ -0.38
Cntn3Q07409 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Gm12566-201ENSMUST00000121479 359 ntBASIC12.68□□□□□ -0.38
Cntn3Q07409 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Gm22119-201ENSMUST00000175594 99 ntBASIC12.68□□□□□ -0.38
Cntn3Q07409 Mir6979-201ENSMUST00000183927 56 ntBASIC12.68□□□□□ -0.38
Cntn3Q07409 Gm28071-201ENSMUST00000190355 478 ntBASIC12.68□□□□□ -0.38
Cntn3Q07409 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.68□□□□□ -0.38
Cntn3Q07409 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cntn3Q07409 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.68□□□□□ -0.38
Cntn3Q07409 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.68□□□□□ -0.38
Cntn3Q07409 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn3Q07409 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.67□□□□□ -0.38
Cntn3Q07409 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Gm22133-201ENSMUST00000102082 109 ntBASIC12.67□□□□□ -0.38
Cntn3Q07409 Gm15711-201ENSMUST00000118889 535 ntBASIC12.67□□□□□ -0.38
Cntn3Q07409 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.67□□□□□ -0.38
Cntn3Q07409 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.67□□□□□ -0.38
Cntn3Q07409 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.67□□□□□ -0.38
Cntn3Q07409 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn3Q07409 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms