Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ly6c1P0CW02 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ly6c1P0CW02 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.27□□□□□ -0.77
Ly6c1P0CW02 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ly6c1P0CW02 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ly6c1P0CW02 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ly6c1P0CW02 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ly6c1P0CW02 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ly6c1P0CW02 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm37234-201ENSMUST00000193259 1441 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 AC122539.3-201ENSMUST00000218355 1431 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm14644-201ENSMUST00000116671 647 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm15937-201ENSMUST00000120727 1235 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm44262-201ENSMUST00000204969 372 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm44651-201ENSMUST00000207343 372 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm18056-201ENSMUST00000207670 568 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm18061-201ENSMUST00000208350 562 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm18063-201ENSMUST00000208529 568 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm18052-201ENSMUST00000208750 559 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 AC121986.1-201ENSMUST00000218588 781 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Ermard-209ENSMUST00000226561 1019 ntBASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ly6c1P0CW02 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 AC158595.1-201ENSMUST00000217989 1435 ntBASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ly6c1P0CW02 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms