Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gm7809-201ENSMUST00000153199 742 ntBASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gm3890-201ENSMUST00000182416 207 ntBASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gm37355-201ENSMUST00000193345 606 ntBASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gm18711-201ENSMUST00000199341 750 ntBASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gm4810-201ENSMUST00000177721 1607 ntBASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm5878E9PUB3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm18719-201ENSMUST00000196696 1413 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm25261-201ENSMUST00000157416 134 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm40466-201ENSMUST00000212174 422 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 AC163296.2-201ENSMUST00000220177 1315 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 AC107452.3-201ENSMUST00000228807 1308 ntBASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm5878E9PUB3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm5878E9PUB3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Gm5878E9PUB3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Gm5878E9PUB3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms