Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.32□□□□□ -0.44
Gm5538W4VSP6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Gm5538W4VSP6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm15276-201ENSMUST00000145953 498 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm25890-201ENSMUST00000177643 165 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm22614-201ENSMUST00000178300 165 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm27320-201ENSMUST00000184892 109 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm4607-201ENSMUST00000206649 577 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm13097-201ENSMUST00000210722 397 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm22042-201ENSMUST00000082989 165 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Gm26110-201ENSMUST00000083971 165 ntBASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm5538W4VSP6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm5538W4VSP6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms