Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm15207-201ENSMUST00000119259 442 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm8815-201ENSMUST00000173809 620 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm9645-201ENSMUST00000197131 792 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhac2Q91Y09 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhac2Q91Y09 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gm11660-201ENSMUST00000120955 412 ntBASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gm37458-201ENSMUST00000194055 410 ntBASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhac2Q91Y09 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Gm22711-201ENSMUST00000116890 133 ntBASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Mir1901-201ENSMUST00000122616 78 ntBASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Gm23045-201ENSMUST00000175041 96 ntBASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Gm29155-201ENSMUST00000185910 269 ntBASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Gm28324-201ENSMUST00000187913 264 ntBASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Gm38117-201ENSMUST00000194653 939 ntBASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhac2Q91Y09 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms