Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.97□□□□□ -0.33
TraipQ8VIG6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Gm23699-201ENSMUST00000158835 135 ntBASIC12.97□□□□□ -0.33
TraipQ8VIG6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.97□□□□□ -0.33
TraipQ8VIG6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.96□□□□□ -0.33
TraipQ8VIG6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm12165-201ENSMUST00000117047 342 ntBASIC12.96□□□□□ -0.33
TraipQ8VIG6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm9550-201ENSMUST00000161130 862 ntBASIC12.96□□□□□ -0.33
TraipQ8VIG6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.96□□□□□ -0.33
TraipQ8VIG6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Ntng1-201ENSMUST00000051253 327 ntBASIC12.96□□□□□ -0.33
TraipQ8VIG6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TraipQ8VIG6 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.96□□□□□ -0.33
TraipQ8VIG6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Lrtm1-203ENSMUST00000224760 3060 ntBASIC12.96□□□□□ -0.34
TraipQ8VIG6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TraipQ8VIG6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms