Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AA914427-201ENSMUST00000193194 1166 ntBASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Gm44364-201ENSMUST00000198368 141 ntBASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim9Q8C7M3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Rprl1-202ENSMUST00000198476 238 ntBASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Gm7783-201ENSMUST00000204795 781 ntBASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim9Q8C7M3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gm14381-201ENSMUST00000122105 414 ntBASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gm38241-201ENSMUST00000192641 898 ntBASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms