Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm5419-201ENSMUST00000119301 527 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm38341-201ENSMUST00000195357 515 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm43758-201ENSMUST00000199500 367 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm24255-201ENSMUST00000104481 128 ntBASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm18893-201ENSMUST00000198416 943 ntBASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm19187-201ENSMUST00000206781 892 ntBASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trub1Q8C0D0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.46□□□□□ -0.42
Trub1Q8C0D0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.46□□□□□ -0.42
Trub1Q8C0D0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm15198-201ENSMUST00000117283 177 ntBASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm14723-201ENSMUST00000118686 215 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms