Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Gm6114-201ENSMUST00000182472 968 ntBASIC11.54□□□□□ -0.56
Rai1Q61818 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.54□□□□□ -0.56
Rai1Q61818 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rai1Q61818 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.54□□□□□ -0.56
Rai1Q61818 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.54□□□□□ -0.56
Rai1Q61818 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Olfr584-201ENSMUST00000098210 964 ntBASIC11.54□□□□□ -0.56
Rai1Q61818 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rai1Q61818 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
Rai1Q61818 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rai1Q61818 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rai1Q61818 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Mir6407-201ENSMUST00000184510 101 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm18059-201ENSMUST00000208073 580 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm23105-201ENSMUST00000083719 134 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm8459-201ENSMUST00000162504 760 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.53□□□□□ -0.56
Rai1Q61818 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Gm44124-201ENSMUST00000204159 472 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Gm18968-201ENSMUST00000221319 862 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Gm23680-201ENSMUST00000083162 164 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rai1Q61818 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.53□□□□□ -0.56
Rai1Q61818 Mir483-201ENSMUST00000093631 73 ntBASIC11.53□□□□□ -0.56
Rai1Q61818 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.52□□□□□ -0.56
Rai1Q61818 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rai1Q61818 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rai1Q61818 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rai1Q61818 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rai1Q61818 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rai1Q61818 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rai1Q61818 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.52□□□□□ -0.57
Rai1Q61818 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rai1Q61818 Gm9089-201ENSMUST00000122027 526 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms