Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf20Q5DTM8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf20Q5DTM8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf20Q5DTM8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf20Q5DTM8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf20Q5DTM8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf20Q5DTM8 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.42□□□□□ -0.1
Rnf20Q5DTM8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm23270-201ENSMUST00000104055 131 ntBASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm14644-201ENSMUST00000116671 647 ntBASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm12015-201ENSMUST00000117065 843 ntBASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm11930-201ENSMUST00000117788 190 ntBASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf20Q5DTM8 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm6334-201ENSMUST00000207083 228 ntBASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf20Q5DTM8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms