Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.4□□□□□ -0.26
Col6a1Q04857 Gm20392-201ENSMUST00000173047 701 ntBASIC13.4□□□□□ -0.26
Col6a1Q04857 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Gm27910-201ENSMUST00000185004 107 ntBASIC13.4□□□□□ -0.26
Col6a1Q04857 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a1Q04857 Gm43184-201ENSMUST00000197247 542 ntBASIC13.4□□□□□ -0.26
Col6a1Q04857 Gm2965-201ENSMUST00000198365 343 ntBASIC13.4□□□□□ -0.26
Col6a1Q04857 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.4□□□□□ -0.26
Col6a1Q04857 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.4□□□□□ -0.26
Col6a1Q04857 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col6a1Q04857 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.4□□□□□ -0.26
Col6a1Q04857 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a1Q04857 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Col6a1Q04857 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col6a1Q04857 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col6a1Q04857 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.39□□□□□ -0.27
Col6a1Q04857 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Col6a1Q04857 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.39□□□□□ -0.27
Col6a1Q04857 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.39□□□□□ -0.27
Col6a1Q04857 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.39□□□□□ -0.27
Col6a1Q04857 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.39□□□□□ -0.27
Col6a1Q04857 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col6a1Q04857 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col6a1Q04857 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.39□□□□□ -0.27
Col6a1Q04857 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.39□□□□□ -0.27
Col6a1Q04857 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.39□□□□□ -0.27
Col6a1Q04857 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a1Q04857 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a1Q04857 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Col6a1Q04857 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a1Q04857 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a1Q04857 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.38□□□□□ -0.27
Col6a1Q04857 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a1Q04857 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.38□□□□□ -0.27
Col6a1Q04857 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.38□□□□□ -0.27
Col6a1Q04857 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a1Q04857 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Gm8325-201ENSMUST00000099086 453 ntBASIC13.38□□□□□ -0.27
Col6a1Q04857 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a1Q04857 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms