Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Nub1P54729 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nub1P54729 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.08□□□□□ -0.32
Nub1P54729 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.07□□□□□ -0.32
Nub1P54729 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nub1P54729 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.07□□□□□ -0.32
Nub1P54729 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nub1P54729 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Gm14644-201ENSMUST00000116671 647 ntBASIC13.07□□□□□ -0.32
Nub1P54729 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.07□□□□□ -0.32
Nub1P54729 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.07□□□□□ -0.32
Nub1P54729 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.07□□□□□ -0.32
Nub1P54729 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.07□□□□□ -0.32
Nub1P54729 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Nub1P54729 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nub1P54729 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.07□□□□□ -0.32
Nub1P54729 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nub1P54729 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.06□□□□□ -0.32
Nub1P54729 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nub1P54729 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Gm5070-201ENSMUST00000177599 862 ntBASIC13.06□□□□□ -0.32
Nub1P54729 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC13.06□□□□□ -0.32
Nub1P54729 Gm18165-201ENSMUST00000217426 928 ntBASIC13.06□□□□□ -0.32
Nub1P54729 Gzmn-202ENSMUST00000225535 989 ntBASIC13.06□□□□□ -0.32
Nub1P54729 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.06□□□□□ -0.32
Nub1P54729 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nub1P54729 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.06□□□□□ -0.32
Nub1P54729 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nub1P54729 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Nub1P54729 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nub1P54729 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nub1P54729 Gm6963-201ENSMUST00000147879 379 ntBASIC13.05□□□□□ -0.32
Nub1P54729 Rprl1-201ENSMUST00000158050 327 ntBASIC13.05□□□□□ -0.32
Nub1P54729 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms