Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.42□□□□□ -0.42
Cxcl12P40224 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.42□□□□□ -0.42
Cxcl12P40224 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcl12P40224 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Acot6-202ENSMUST00000222921 3622 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cxcl12P40224 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm15615-201ENSMUST00000118876 198 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm11783-201ENSMUST00000119549 885 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm15610-201ENSMUST00000120584 195 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm22379-201ENSMUST00000157480 131 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm22846-201ENSMUST00000157706 270 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm5870-201ENSMUST00000196461 282 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm6423-201ENSMUST00000204315 934 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.41□□□□□ -0.42
Cxcl12P40224 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm6390-201ENSMUST00000215034 589 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.41□□□□□ -0.42
Cxcl12P40224 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcl12P40224 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Mir671-201ENSMUST00000102432 98 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Gm11560-201ENSMUST00000117567 948 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Gm14993-201ENSMUST00000121180 164 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Gm9507-202ENSMUST00000180157 654 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Gm38151-201ENSMUST00000195085 289 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Gm16380-201ENSMUST00000077997 478 ntBASIC12.4□□□□□ -0.42
Cxcl12P40224 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms