Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.18□□□□□ -0.62
Sftpa1P35242 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm26013-201ENSMUST00000104404 119 ntBASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm14193-201ENSMUST00000105067 153 ntBASIC11.18□□□□□ -0.62
Sftpa1P35242 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm13916-201ENSMUST00000117368 628 ntBASIC11.18□□□□□ -0.62
Sftpa1P35242 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sftpa1P35242 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Sftpa1P35242 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.18□□□□□ -0.62
Sftpa1P35242 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.17□□□□□ -0.62
Sftpa1P35242 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm25076-201ENSMUST00000104098 132 ntBASIC11.17□□□□□ -0.62
Sftpa1P35242 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm12990-201ENSMUST00000120372 468 ntBASIC11.17□□□□□ -0.62
Sftpa1P35242 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm22877-201ENSMUST00000175451 105 ntBASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm18367-201ENSMUST00000176139 600 ntBASIC11.17□□□□□ -0.62
Sftpa1P35242 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.17□□□□□ -0.62
Sftpa1P35242 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sftpa1P35242 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Sftpa1P35242 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sftpa1P35242 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sftpa1P35242 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Sftpa1P35242 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sftpa1P35242 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sftpa1P35242 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sftpa1P35242 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sftpa1P35242 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sftpa1P35242 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms