Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
APLFQ8IW19 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.23■□□□□ 0.03
APLFQ8IW19 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.23■□□□□ 0.03
APLFQ8IW19 API5-211ENST00000534695 560 ntTSL 5 BASIC15.23■□□□□ 0.03
APLFQ8IW19 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.23■□□□□ 0.03
APLFQ8IW19 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.23■□□□□ 0.03
APLFQ8IW19 AL133215.2-201ENST00000609242 977 ntBASIC15.23■□□□□ 0.03
APLFQ8IW19 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APLFQ8IW19 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 BX640514.1-201ENST00000583223 1918 ntBASIC15.23■□□□□ 0.03
APLFQ8IW19 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.23■□□□□ 0.03
APLFQ8IW19 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
APLFQ8IW19 AL391825.1-201ENST00000457671 1364 ntBASIC15.23■□□□□ 0.03
APLFQ8IW19 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
APLFQ8IW19 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.22■□□□□ 0.03
APLFQ8IW19 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.22■□□□□ 0.03
APLFQ8IW19 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.22■□□□□ 0.03
APLFQ8IW19 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.22■□□□□ 0.03
APLFQ8IW19 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.22■□□□□ 0.03
APLFQ8IW19 AC007274.1-201ENST00000439805 662 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.22■□□□□ 0.03
APLFQ8IW19 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.22■□□□□ 0.03
APLFQ8IW19 BANF1P1-201ENST00000553684 263 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 AL079307.3-201ENST00000556114 283 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.22■□□□□ 0.03
APLFQ8IW19 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.22■□□□□ 0.03
APLFQ8IW19 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.22■□□□□ 0.03
APLFQ8IW19 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.22■□□□□ 0.03
APLFQ8IW19 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
APLFQ8IW19 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.22■□□□□ 0.03
APLFQ8IW19 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.22■□□□□ 0.03
APLFQ8IW19 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
APLFQ8IW19 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 AC004840.1-201ENST00000636359 365 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
APLFQ8IW19 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.22■□□□□ 0.03
APLFQ8IW19 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APLFQ8IW19 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
APLFQ8IW19 AC112693.3-201ENST00000624819 1983 ntBASIC15.22■□□□□ 0.03
APLFQ8IW19 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
APLFQ8IW19 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.21■□□□□ 0.03
APLFQ8IW19 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.21■□□□□ 0.03
APLFQ8IW19 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 GPAA1P2-202ENST00000606848 1787 ntBASIC15.21■□□□□ 0.03
APLFQ8IW19 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
APLFQ8IW19 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 AC138969.3-201ENST00000546612 1459 ntBASIC15.21■□□□□ 0.03
APLFQ8IW19 AC138932.2-201ENST00000548268 1459 ntBASIC15.21■□□□□ 0.03
APLFQ8IW19 AC126755.4-201ENST00000549796 1459 ntBASIC15.21■□□□□ 0.03
APLFQ8IW19 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
APLFQ8IW19 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.21■□□□□ 0.03
APLFQ8IW19 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
APLFQ8IW19 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.21■□□□□ 0.03
APLFQ8IW19 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.21■□□□□ 0.03
APLFQ8IW19 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APLFQ8IW19 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms