Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4bQ8BGE6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm11989-201ENSMUST00000117240 672 ntBASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm11362-201ENSMUST00000118838 850 ntBASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.42□□□□□ -0.58
Atg4bQ8BGE6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gm7722-201ENSMUST00000120646 741 ntBASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gm17376-201ENSMUST00000166016 84 ntBASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Gm27320-201ENSMUST00000184892 109 ntBASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 AA914427-201ENSMUST00000193194 1166 ntBASIC11.41□□□□□ -0.58
Atg4bQ8BGE6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms