Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfaip3Q60769 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfaip3Q60769 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.46□□□□□ -0.57
Tnfaip3Q60769 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Gm23912-201ENSMUST00000104687 87 ntBASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Gm17812-201ENSMUST00000204935 318 ntBASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Gm45433-201ENSMUST00000209386 247 ntBASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfaip3Q60769 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfaip3Q60769 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm11439-201ENSMUST00000118598 409 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm24990-201ENSMUST00000157406 323 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm18711-201ENSMUST00000199341 750 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm8385-201ENSMUST00000058999 643 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfaip3Q60769 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfaip3Q60769 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms