Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Sssca1P56873 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.79□□□□□ -0.84
Sssca1P56873 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sssca1P56873 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Sssca1P56873 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.79□□□□□ -0.84
Sssca1P56873 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Sssca1P56873 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Gm14928-201ENSMUST00000120198 477 ntBASIC9.78□□□□□ -0.84
Sssca1P56873 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.78□□□□□ -0.84
Sssca1P56873 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Gm6745-201ENSMUST00000199216 526 ntBASIC9.78□□□□□ -0.84
Sssca1P56873 Gm44958-201ENSMUST00000203734 736 ntBASIC9.78□□□□□ -0.84
Sssca1P56873 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.78□□□□□ -0.84
Sssca1P56873 Gm45925-201ENSMUST00000218882 744 ntBASIC9.78□□□□□ -0.84
Sssca1P56873 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.78□□□□□ -0.84
Sssca1P56873 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.78□□□□□ -0.84
Sssca1P56873 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.78□□□□□ -0.84
Sssca1P56873 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sssca1P56873 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sssca1P56873 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.84
Sssca1P56873 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Sssca1P56873 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.77□□□□□ -0.84
Sssca1P56873 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.77□□□□□ -0.84
Sssca1P56873 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sssca1P56873 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sssca1P56873 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Sssca1P56873 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Sssca1P56873 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Sssca1P56873 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Sssca1P56873 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sssca1P56873 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms