Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Hoxc9P09633 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc9P09633 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc9P09633 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hoxc9P09633 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC15.63■□□□□ 0.09
Hoxc9P09633 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc9P09633 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc9P09633 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.63■□□□□ 0.09
Hoxc9P09633 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc9P09633 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm14942-201ENSMUST00000119642 336 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm28937-201ENSMUST00000185413 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm29400-201ENSMUST00000187208 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm28662-201ENSMUST00000188446 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm28251-201ENSMUST00000188835 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm37318-201ENSMUST00000194325 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm38017-201ENSMUST00000194768 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm37287-201ENSMUST00000195449 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm37793-201ENSMUST00000195548 695 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm6108-201ENSMUST00000208365 367 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.62■□□□□ 0.09
Hoxc9P09633 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc9P09633 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Hoxc9P09633 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hoxc9P09633 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm42518-201ENSMUST00000196277 938 ntBASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm8342-201ENSMUST00000209839 757 ntBASIC15.61■□□□□ 0.09
Hoxc9P09633 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.61■□□□□ 0.09
Hoxc9P09633 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc9P09633 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.6■□□□□ 0.09
Hoxc9P09633 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms