Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
BckdkO55028 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Cog3-203ENSMUST00000227473 4197 ntBASIC11.28□□□□□ -0.6
BckdkO55028 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.28□□□□□ -0.6
BckdkO55028 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
BckdkO55028 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
BckdkO55028 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
BckdkO55028 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.27□□□□□ -0.6
BckdkO55028 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
BckdkO55028 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.27□□□□□ -0.61
BckdkO55028 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
BckdkO55028 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.27□□□□□ -0.61
BckdkO55028 Gm14130-201ENSMUST00000118417 987 ntBASIC11.27□□□□□ -0.61
BckdkO55028 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.27□□□□□ -0.61
BckdkO55028 Gm14109-201ENSMUST00000118814 309 ntBASIC11.27□□□□□ -0.61
BckdkO55028 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.27□□□□□ -0.61
BckdkO55028 Gm13736-201ENSMUST00000119272 253 ntBASIC11.27□□□□□ -0.61
BckdkO55028 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.27□□□□□ -0.61
BckdkO55028 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.27□□□□□ -0.61
BckdkO55028 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.27□□□□□ -0.61
BckdkO55028 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
BckdkO55028 Gm18212-201ENSMUST00000211678 889 ntBASIC11.27□□□□□ -0.61
BckdkO55028 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.27□□□□□ -0.61
BckdkO55028 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.27□□□□□ -0.61
BckdkO55028 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
BckdkO55028 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.27□□□□□ -0.61
BckdkO55028 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.27□□□□□ -0.61
BckdkO55028 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.27□□□□□ -0.61
BckdkO55028 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.27□□□□□ -0.61
BckdkO55028 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
BckdkO55028 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.26□□□□□ -0.61
BckdkO55028 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
BckdkO55028 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
BckdkO55028 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Gm12997-201ENSMUST00000120207 640 ntBASIC11.26□□□□□ -0.61
BckdkO55028 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.26□□□□□ -0.61
BckdkO55028 Gm25043-201ENSMUST00000158604 212 ntBASIC11.26□□□□□ -0.61
BckdkO55028 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.26□□□□□ -0.61
BckdkO55028 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.26□□□□□ -0.61
BckdkO55028 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.26□□□□□ -0.61
BckdkO55028 Gm26461-201ENSMUST00000175064 290 ntBASIC11.26□□□□□ -0.61
BckdkO55028 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
BckdkO55028 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.26□□□□□ -0.61
BckdkO55028 Gm18827-201ENSMUST00000188341 790 ntBASIC11.26□□□□□ -0.61
BckdkO55028 Gm44967-201ENSMUST00000207047 631 ntBASIC11.26□□□□□ -0.61
BckdkO55028 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
BckdkO55028 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.26□□□□□ -0.61
BckdkO55028 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms