Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac1O09106 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac1O09106 Gm45496-201ENSMUST00000209918 2917 ntBASIC14.4□□□□□ -0.1
Hdac1O09106 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac1O09106 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac1O09106 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac1O09106 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac1O09106 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.39□□□□□ -0.11
Hdac1O09106 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.39□□□□□ -0.11
Hdac1O09106 Gm28882-201ENSMUST00000185504 314 ntBASIC14.39□□□□□ -0.11
Hdac1O09106 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.39□□□□□ -0.11
Hdac1O09106 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Hdac1O09106 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.39□□□□□ -0.11
Hdac1O09106 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.39□□□□□ -0.11
Hdac1O09106 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.39□□□□□ -0.11
Hdac1O09106 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Hdac1O09106 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac1O09106 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hdac1O09106 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hdac1O09106 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hdac1O09106 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.38□□□□□ -0.11
Hdac1O09106 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm14441-201ENSMUST00000121960 540 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.38□□□□□ -0.11
Hdac1O09106 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.38□□□□□ -0.11
Hdac1O09106 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm19994-201ENSMUST00000217086 586 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hdac1O09106 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.38□□□□□ -0.11
Hdac1O09106 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac1O09106 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.38□□□□□ -0.11
Hdac1O09106 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hdac1O09106 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hdac1O09106 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.37□□□□□ -0.11
Hdac1O09106 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hdac1O09106 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hdac1O09106 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Hdac1O09106 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hdac1O09106 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.37□□□□□ -0.11
Hdac1O09106 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.37□□□□□ -0.11
Hdac1O09106 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.37□□□□□ -0.11
Hdac1O09106 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac1O09106 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms