Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 CNN2P8-201ENST00000421872 913 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 RPL7P3-201ENST00000441388 714 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 ATP5G2P4-201ENST00000442175 420 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 KLF2P4-201ENST00000451959 1225 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AC119751.2-201ENST00000504529 210 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AP000812.2-201ENST00000538934 718 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AC004466.1-201ENST00000599515 1080 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 ENPP7P14-201ENST00000621765 1040 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AC132938.4-201ENST00000623835 848 ntBASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 DBET-201ENST00000630918 3363 ntBASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C9orf40Q8IXQ3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AC245100.3-201ENST00000441281 285 ntBASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AC104989.1-201ENST00000519711 778 ntBASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AC078819.1-201ENST00000547454 765 ntBASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AC012085.1-201ENST00000548270 765 ntBASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 AC068587.6-202ENST00000641839 5619 ntBASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
C9orf40Q8IXQ3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms