Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm22133-201ENSMUST00000102082 109 ntBASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm7857-201ENSMUST00000117957 358 ntBASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm4909-201ENSMUST00000118749 794 ntBASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim47Q8C0E3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Mir6927-201ENSMUST00000184494 71 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Rps4l-202ENSMUST00000204242 789 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 AC114573.1-201ENSMUST00000224120 1210 ntBASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trim47Q8C0E3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms