Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.23□□□□□ -0.61
Cacna1aP97445 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cacna1aP97445 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Mir744-201ENSMUST00000103261 100 ntBASIC11.22□□□□□ -0.61
Cacna1aP97445 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.22□□□□□ -0.61
Cacna1aP97445 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cacna1aP97445 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.22□□□□□ -0.61
Cacna1aP97445 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.22□□□□□ -0.61
Cacna1aP97445 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cacna1aP97445 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm11511-201ENSMUST00000118146 540 ntBASIC11.21□□□□□ -0.61
Cacna1aP97445 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.21□□□□□ -0.61
Cacna1aP97445 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm40879-201ENSMUST00000220759 612 ntBASIC11.21□□□□□ -0.61
Cacna1aP97445 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cacna1aP97445 Gm26448-201ENSMUST00000082446 203 ntBASIC11.21□□□□□ -0.61
Cacna1aP97445 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cacna1aP97445 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms