Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.77■□□□□ 0.28
PMS1P54277 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PMS1P54277 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.77■□□□□ 0.28
PMS1P54277 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.77■□□□□ 0.28
PMS1P54277 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.77■□□□□ 0.28
PMS1P54277 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.77■□□□□ 0.28
PMS1P54277 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PMS1P54277 CYMP-203ENST00000474680 1263 ntBASIC16.77■□□□□ 0.28
PMS1P54277 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.77■□□□□ 0.28
PMS1P54277 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.77■□□□□ 0.28
PMS1P54277 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.77■□□□□ 0.28
PMS1P54277 BRI3BPP1-201ENST00000594224 787 ntBASIC16.77■□□□□ 0.28
PMS1P54277 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.77■□□□□ 0.27
PMS1P54277 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PMS1P54277 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PMS1P54277 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PMS1P54277 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PMS1P54277 AC015656.1-201ENST00000624209 3578 ntBASIC16.77■□□□□ 0.27
PMS1P54277 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PMS1P54277 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PMS1P54277 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PMS1P54277 NORAD-201ENST00000565493 5339 ntBASIC16.77■□□□□ 0.27
PMS1P54277 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.77■□□□□ 0.27
PMS1P54277 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PMS1P54277 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.76■□□□□ 0.27
PMS1P54277 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.76■□□□□ 0.27
PMS1P54277 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PMS1P54277 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.76■□□□□ 0.27
PMS1P54277 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.76■□□□□ 0.27
PMS1P54277 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PMS1P54277 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.76■□□□□ 0.27
PMS1P54277 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.76■□□□□ 0.27
PMS1P54277 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.76■□□□□ 0.27
PMS1P54277 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.76■□□□□ 0.27
PMS1P54277 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.76■□□□□ 0.27
PMS1P54277 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
PMS1P54277 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.76■□□□□ 0.27
PMS1P54277 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PMS1P54277 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.76■□□□□ 0.27
PMS1P54277 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PMS1P54277 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PMS1P54277 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PMS1P54277 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.75■□□□□ 0.27
PMS1P54277 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.75■□□□□ 0.27
PMS1P54277 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.75■□□□□ 0.27
PMS1P54277 AC098850.1-201ENST00000419919 790 ntBASIC16.75■□□□□ 0.27
PMS1P54277 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.75■□□□□ 0.27
PMS1P54277 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.75■□□□□ 0.27
PMS1P54277 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.75■□□□□ 0.27
PMS1P54277 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.75■□□□□ 0.27
PMS1P54277 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.75■□□□□ 0.27
PMS1P54277 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms