Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rph3aP47708 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rph3aP47708 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rph3aP47708 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.78□□□□□ -0.52
Rph3aP47708 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rph3aP47708 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.78□□□□□ -0.52
Rph3aP47708 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm6621-201ENSMUST00000193251 772 ntBASIC11.78□□□□□ -0.52
Rph3aP47708 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm44882-201ENSMUST00000205702 802 ntBASIC11.78□□□□□ -0.52
Rph3aP47708 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.78□□□□□ -0.52
Rph3aP47708 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm21769-201ENSMUST00000211922 111 ntBASIC11.78□□□□□ -0.52
Rph3aP47708 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.78□□□□□ -0.52
Rph3aP47708 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.78□□□□□ -0.52
Rph3aP47708 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.78□□□□□ -0.52
Rph3aP47708 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.78□□□□□ -0.52
Rph3aP47708 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rph3aP47708 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rph3aP47708 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Rph3aP47708 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.77□□□□□ -0.52
Rph3aP47708 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.77□□□□□ -0.52
Rph3aP47708 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.77□□□□□ -0.52
Rph3aP47708 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Rph3aP47708 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rph3aP47708 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.77□□□□□ -0.52
Rph3aP47708 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rph3aP47708 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Gm25214-201ENSMUST00000104573 129 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Rph3aP47708 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.77□□□□□ -0.53
Rph3aP47708 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Rph3aP47708 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rph3aP47708 Gm2991-201ENSMUST00000173338 480 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Gm42937-201ENSMUST00000197360 752 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 Gm30285-201ENSMUST00000214614 422 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.77□□□□□ -0.53
Rph3aP47708 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rph3aP47708 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Rph3aP47708 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms