Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm27320-201ENSMUST00000184892 109 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm38241-201ENSMUST00000192641 898 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm38317-201ENSMUST00000195564 343 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm18893-201ENSMUST00000198416 943 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Gm44651-201ENSMUST00000207343 372 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Olfr582-201ENSMUST00000098212 960 ntBASIC11.12□□□□□ -0.63
Nkx2-2P42586 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-2P42586 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-2P42586 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.11□□□□□ -0.63
Nkx2-2P42586 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkx2-2P42586 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms