Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Cd9-ps-201ENSMUST00000174687 650 ntBASIC9.77□□□□□ -0.85
Chd6A3KFM7 Gm18042-201ENSMUST00000219887 790 ntBASIC9.77□□□□□ -0.85
Chd6A3KFM7 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC9.77□□□□□ -0.85
Chd6A3KFM7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Chd6A3KFM7 Gm11475-201ENSMUST00000118482 476 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 AC103672.1-201ENSMUST00000227502 365 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm9523-201ENSMUST00000199146 1159 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Mir704-201ENSMUST00000102106 77 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm14395-201ENSMUST00000120494 563 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Mir3091-201ENSMUST00000175086 76 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm32102-201ENSMUST00000196885 241 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm42821-201ENSMUST00000199771 489 ntBASIC9.76□□□□□ -0.85
Chd6A3KFM7 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Chd6A3KFM7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Chd6A3KFM7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms