Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 KLF2P1-201ENST00000447438 1042 ntBASIC22.16■■□□□ 1.14
HFM1A2PYH4 CICP12-201ENST00000455801 843 ntBASIC22.16■■□□□ 1.14
HFM1A2PYH4 SERPINA13P-202ENST00000478994 924 ntBASIC22.16■■□□□ 1.14
HFM1A2PYH4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 HNRNPA1P36-201ENST00000521313 955 ntBASIC22.16■■□□□ 1.14
HFM1A2PYH4 AC126915.1-201ENST00000522847 1038 ntBASIC22.16■■□□□ 1.14
HFM1A2PYH4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 MIR3615-201ENST00000581999 87 ntBASIC22.16■■□□□ 1.14
HFM1A2PYH4 BNIP3P13-201ENST00000599968 566 ntBASIC22.16■■□□□ 1.14
HFM1A2PYH4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
HFM1A2PYH4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HFM1A2PYH4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 AL022328.3-201ENST00000607943 679 ntBASIC22.15■■□□□ 1.14
HFM1A2PYH4 AC007663.3-201ENST00000609632 465 ntBASIC22.15■■□□□ 1.14
HFM1A2PYH4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 AC092135.3-201ENST00000624151 1846 ntBASIC22.15■■□□□ 1.14
HFM1A2PYH4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HFM1A2PYH4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC22.15■■□□□ 1.14
HFM1A2PYH4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HFM1A2PYH4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HFM1A2PYH4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 KRT8P29-201ENST00000420409 1371 ntBASIC22.14■■□□□ 1.14
HFM1A2PYH4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HFM1A2PYH4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
HFM1A2PYH4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HFM1A2PYH4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HFM1A2PYH4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HFM1A2PYH4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
HFM1A2PYH4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms