Protein–RNA interactions for Protein: Q9CZN4

Shisa9, Protein shisa-9, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa9Q9CZN4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Shisa9Q9CZN4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Mir877-201ENSMUST00000104738 85 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm13665-201ENSMUST00000120830 528 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm5070-201ENSMUST00000177599 862 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm4857-201ENSMUST00000192718 785 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm44882-201ENSMUST00000205702 802 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm19187-201ENSMUST00000206781 892 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm44967-201ENSMUST00000207047 631 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.53□□□□□ -0.88
Shisa9Q9CZN4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.88
Shisa9Q9CZN4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Shisa9Q9CZN4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Shisa9Q9CZN4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Shisa9Q9CZN4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms