Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ACKR1-201ENST00000368121 1240 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 PGGT1BP2-201ENST00000398621 1028 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ACTBP8-201ENST00000403258 1108 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AL139094.1-201ENST00000405549 1188 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 YBX1P6-201ENST00000442962 1002 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 HOMER2P2-201ENST00000451621 847 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 KRT18P25-201ENST00000508931 1278 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 RNA5SP486-201ENST00000515961 83 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 RNA5SP412-201ENST00000516234 123 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CD74-212ENST00000524315 584 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ACTG1P17-201ENST00000558391 1119 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC004223.2-201ENST00000590309 544 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC073413.1-201ENST00000603927 732 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AL451050.2-201ENST00000606967 682 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC139749.1-202ENST00000617529 3139 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 LINC02228-204ENST00000642115 2962 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms