Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 AC093214.1-201ENST00000511688 1107 ntBASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 DRD5P1-201ENST00000456605 1438 ntBASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST2H3AQ71DI3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 CICP24-201ENST00000605464 2705 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 CYMP-203ENST00000474680 1263 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 FAM86LP-201ENST00000478302 853 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC026410.3-201ENST00000514280 936 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 DOC2GP-202ENST00000514950 1163 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC023310.3-201ENST00000557027 670 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC100756.1-201ENST00000562736 682 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 RRP7BP-205ENST00000566851 833 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC138749.3-201ENST00000567691 622 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC036164.1-201ENST00000570544 333 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 AC116165.1-201ENST00000611806 668 ntBASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms