Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxd8P23463 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxd8P23463 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Gm15566-201ENSMUST00000121130 590 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Mir3060-201ENSMUST00000175339 83 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxd8P23463 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Gm9463-201ENSMUST00000206707 601 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 Gm9132-201ENSMUST00000210182 832 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxd8P23463 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxd8P23463 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hoxd8P23463 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hoxd8P23463 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Gm8894-201ENSMUST00000074642 666 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxd8P23463 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.58□□□□□ -0.4
Hoxd8P23463 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxd8P23463 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxd8P23463 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxd8P23463 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm11956-201ENSMUST00000119525 512 ntBASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Mir8115-201ENSMUST00000184992 119 ntBASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm38216-201ENSMUST00000194872 1214 ntBASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.57□□□□□ -0.4
Hoxd8P23463 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxd8P23463 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.57□□□□□ -0.4
Hoxd8P23463 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxd8P23463 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxd8P23463 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxd8P23463 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms