Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm13829-201ENSMUST00000119600 138 ntBASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm5370-201ENSMUST00000187187 574 ntBASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm37008-201ENSMUST00000195712 319 ntBASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps39Q8R5L3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.21□□□□□ -0.46
Vps39Q8R5L3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps39Q8R5L3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Gm18187-201ENSMUST00000196476 984 ntBASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Gm42693-201ENSMUST00000196779 631 ntBASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps39Q8R5L3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms