Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL645933.1-201ENST00000440087 609 ntBASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 AL354861.1-201ENST00000445213 355 ntBASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 IGHEP1-201ENST00000521393 651 ntBASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 IL9RP3-201ENST00000442856 1674 ntBASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMC1BQ8NDV3 AC046158.3-201ENST00000624947 2558 ntBASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 MIR557-201ENST00000385239 98 ntBASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AC244197.1-201ENST00000456494 951 ntBASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AL451007.2-201ENST00000632004 563 ntBASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AC022211.2-201ENST00000585075 2527 ntBASIC17.92■□□□□ 0.46
SMC1BQ8NDV3 AC055811.4-201ENST00000624039 1754 ntBASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 FLJ16779-201ENST00000612722 7638 ntBASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AC027237.1-201ENST00000560942 655 ntBASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AC055811.3-201ENST00000584952 686 ntBASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AL627230.2-201ENST00000613254 655 ntBASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AP001184.1-201ENST00000637936 376 ntBASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 NKILA-202ENST00000614771 2598 ntBASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMC1BQ8NDV3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms