Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Gm14109-201ENSMUST00000118814 309 ntBASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp560Q3URI6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Gm23912-201ENSMUST00000104687 87 ntBASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Zfp560Q3URI6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.24□□□□□ -0.45
Zfp560Q3URI6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.24□□□□□ -0.45
Zfp560Q3URI6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Gm37259-201ENSMUST00000193903 849 ntBASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.24□□□□□ -0.45
Zfp560Q3URI6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Zfp560Q3URI6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms