Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gm9630-201ENSMUST00000178304 885 ntBASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gm5714-201ENSMUST00000197343 566 ntBASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim7Q3TJD7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Gm22711-201ENSMUST00000116890 133 ntBASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Gm18367-201ENSMUST00000176139 600 ntBASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Gm5621-201ENSMUST00000187303 640 ntBASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim7Q3TJD7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Gm25063-201ENSMUST00000104666 94 ntBASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.6□□□□□ -0.23
Pdlim7Q3TJD7 Gm15744-201ENSMUST00000161734 213 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms