Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 AC005840.4-201ENST00000541242 2494 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 CICP24-201ENST00000605464 2705 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC125807.1-201ENST00000483097 614 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC067863.1-201ENST00000494933 530 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC004449.1-201ENST00000564240 433 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC015911.4-201ENST00000588022 1070 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AL138828.2-201ENST00000615812 383 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 SPDYE12P-201ENST00000618416 771 ntBASIC16.63■□□□□ 0.25
CCDC172P0C7W6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC172P0C7W6 LINC00528-201ENST00000600723 2160 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 REXO1L2P-201ENST00000425429 2069 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 KRT18P13-201ENST00000400056 1290 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 KRT18P64-201ENST00000434946 1219 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 DNAJB3-202ENST00000449667 1266 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 KLF2P3-201ENST00000451977 1087 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AC109322.1-201ENST00000524499 1264 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AL512361.1-201ENST00000554200 418 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AC025181.2-201ENST00000606994 802 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 Z92544.3-201ENST00000624747 417 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AF228730.6-201ENST00000641497 218 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AC084121.3-201ENST00000641716 218 ntBASIC16.62■□□□□ 0.25
CCDC172P0C7W6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms