Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 AL359711.2-201ENST00000563105 872 ntBASIC13.65□□□□□ -0.22
TRAF3IP2O43734 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 WASH4P-201ENST00000564273 1246 ntBASIC13.65□□□□□ -0.22
TRAF3IP2O43734 AC140912.1-201ENST00000577171 1054 ntBASIC13.65□□□□□ -0.22
TRAF3IP2O43734 AC008494.3-201ENST00000606615 944 ntBASIC13.65□□□□□ -0.22
TRAF3IP2O43734 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAF3IP2O43734 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.65□□□□□ -0.23
TRAF3IP2O43734 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRAF3IP2O43734 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AL360270.3-201ENST00000609118 1348 ntBASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 KRT8P22-201ENST00000562317 1415 ntBASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AL158070.2-201ENST00000623713 1621 ntBASIC13.64□□□□□ -0.23
TRAF3IP2O43734 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AJ011931.1-201ENST00000618749 2492 ntBASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.64□□□□□ -0.23
TRAF3IP2O43734 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAF3IP2O43734 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 AL645937.2-201ENST00000396808 931 ntBASIC13.63□□□□□ -0.23
TRAF3IP2O43734 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms