Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 AL136982.4-201ENST00000437689 1740 ntBASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 IGLL3P-201ENST00000412472 434 ntBASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 HCG4P8-203ENST00000443049 980 ntBASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 RNA5SP410-201ENST00000516285 106 ntBASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 CICP11-201ENST00000434745 2827 ntBASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 AC084364.1-201ENST00000551967 1556 ntBASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP3Q9Y2W7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 AL359881.3-201ENST00000602640 1721 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 HNRNPDP1-201ENST00000439535 754 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 HCG4B-203ENST00000450128 991 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 AC018712.1-201ENST00000455767 687 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 AC092910.1-201ENST00000482027 1129 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 AC010507.1-201ENST00000633895 436 ntBASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.88□□□□□ -0.35
KCNIP3Q9Y2W7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms