Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Gm23912-201ENSMUST00000104687 87 ntBASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Mospd4-201ENSMUST00000180618 576 ntBASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Gm38002-201ENSMUST00000193255 180 ntBASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Gm42693-201ENSMUST00000196779 631 ntBASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.92□□□□□ -0.18
Trim11Q99PQ2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim11Q99PQ2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Gm25043-201ENSMUST00000158604 212 ntBASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Gm28882-201ENSMUST00000185504 314 ntBASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Gm38158-201ENSMUST00000194617 339 ntBASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Trim11Q99PQ2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim11Q99PQ2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms