Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trnp1Q80ZI1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trnp1Q80ZI1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trnp1Q80ZI1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trnp1Q80ZI1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trnp1Q80ZI1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm12948-201ENSMUST00000119406 682 ntBASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm15610-201ENSMUST00000120584 195 ntBASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm12783-201ENSMUST00000121425 397 ntBASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm12030-201ENSMUST00000121917 223 ntBASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm5706-201ENSMUST00000181525 993 ntBASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm38151-201ENSMUST00000195085 289 ntBASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm44487-201ENSMUST00000205145 325 ntBASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.68□□□□□ -0.22
Trnp1Q80ZI1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm5257-201ENSMUST00000121823 790 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm9135-201ENSMUST00000182963 990 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm44315-201ENSMUST00000203041 219 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm19640-201ENSMUST00000214849 464 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trnp1Q80ZI1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trnp1Q80ZI1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms