Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ssx9Q6XAS3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssx9Q6XAS3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.15□□□□□ -0.47
Ssx9Q6XAS3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssx9Q6XAS3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ssx9Q6XAS3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssx9Q6XAS3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssx9Q6XAS3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ssx9Q6XAS3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms