Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ift88Q61371 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.5□□□□□ -0.25
Ift88Q61371 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.5□□□□□ -0.25
Ift88Q61371 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.49□□□□□ -0.25
Ift88Q61371 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ift88Q61371 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ift88Q61371 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.49□□□□□ -0.25
Ift88Q61371 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.49□□□□□ -0.25
Ift88Q61371 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.49□□□□□ -0.25
Ift88Q61371 Gm5781-201ENSMUST00000219792 443 ntBASIC13.49□□□□□ -0.25
Ift88Q61371 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.49□□□□□ -0.25
Ift88Q61371 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ift88Q61371 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ift88Q61371 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ift88Q61371 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ift88Q61371 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ift88Q61371 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.48□□□□□ -0.25
Ift88Q61371 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ift88Q61371 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.48□□□□□ -0.25
Ift88Q61371 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ift88Q61371 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Gm7809-201ENSMUST00000153199 742 ntBASIC13.48□□□□□ -0.25
Ift88Q61371 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.48□□□□□ -0.25
Ift88Q61371 Gm6222-202ENSMUST00000182143 629 ntBASIC13.48□□□□□ -0.25
Ift88Q61371 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.48□□□□□ -0.25
Ift88Q61371 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.48□□□□□ -0.25
Ift88Q61371 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Ift88Q61371 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ift88Q61371 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.48□□□□□ -0.25
Ift88Q61371 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms