Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.9□□□□□ -0.5
Sox18P43680 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox18P43680 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.9□□□□□ -0.5
Sox18P43680 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox18P43680 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox18P43680 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Gm4482-201ENSMUST00000200876 742 ntBASIC11.9□□□□□ -0.5
Sox18P43680 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.9□□□□□ -0.5
Sox18P43680 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox18P43680 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC11.9□□□□□ -0.5
Sox18P43680 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox18P43680 Gm6867-201ENSMUST00000219165 425 ntBASIC11.9□□□□□ -0.5
Sox18P43680 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox18P43680 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.9□□□□□ -0.5
Sox18P43680 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox18P43680 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sox18P43680 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox18P43680 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sox18P43680 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox18P43680 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.9□□□□□ -0.51
Sox18P43680 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.9□□□□□ -0.51
Sox18P43680 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox18P43680 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox18P43680 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sox18P43680 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox18P43680 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sox18P43680 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 AC158595.1-201ENSMUST00000217989 1435 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Gm37028-201ENSMUST00000194276 107 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Mir7686-201ENSMUST00000200604 57 ntBASIC11.89□□□□□ -0.51
Sox18P43680 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 AC153932.1-201ENSMUST00000218558 787 ntBASIC11.89□□□□□ -0.51
Sox18P43680 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sox18P43680 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Gm22005-201ENSMUST00000082795 141 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.89□□□□□ -0.51
Sox18P43680 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox18P43680 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox18P43680 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox18P43680 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms