Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdkn1aP39689 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdkn1aP39689 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm15711-201ENSMUST00000118889 535 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm7722-201ENSMUST00000120646 741 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Rprl1-201ENSMUST00000158050 327 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm5616-201ENSMUST00000165252 384 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm8741-201ENSMUST00000174736 384 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.08□□□□□ -0.8
Cdkn1aP39689 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdkn1aP39689 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm22133-201ENSMUST00000102082 109 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm23912-201ENSMUST00000104687 87 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm12380-201ENSMUST00000119012 544 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 B9d1os-201ENSMUST00000137010 674 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Mir5120-201ENSMUST00000175020 78 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Gm44882-201ENSMUST00000205702 802 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdkn1aP39689 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.07□□□□□ -0.8
Cdkn1aP39689 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdkn1aP39689 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms