Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm14719-201ENSMUST00000121891 340 ntBASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm44397-201ENSMUST00000195950 113 ntBASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.27□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm11978-201ENSMUST00000122315 466 ntBASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.26□□□□□ -0.93
Trav3n-3A0A0G2JEM0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms