Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h8Q9JJ48 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Zc3h8Q9JJ48 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h8Q9JJ48 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h8Q9JJ48 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Zc3h8Q9JJ48 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h8Q9JJ48 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Zc3h8Q9JJ48 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Zc3h8Q9JJ48 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h8Q9JJ48 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h8Q9JJ48 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.27■□□□□ 0.67
Zc3h8Q9JJ48 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zc3h8Q9JJ48 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.27■□□□□ 0.67
Zc3h8Q9JJ48 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Zc3h8Q9JJ48 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h8Q9JJ48 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.26■□□□□ 0.67
Zc3h8Q9JJ48 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.26■□□□□ 0.67
Zc3h8Q9JJ48 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.26■□□□□ 0.67
Zc3h8Q9JJ48 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h8Q9JJ48 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Zc3h8Q9JJ48 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h8Q9JJ48 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h8Q9JJ48 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h8Q9JJ48 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h8Q9JJ48 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h8Q9JJ48 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h8Q9JJ48 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h8Q9JJ48 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h8Q9JJ48 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h8Q9JJ48 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h8Q9JJ48 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h8Q9JJ48 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.22■□□□□ 0.67
Zc3h8Q9JJ48 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.22■□□□□ 0.67
Zc3h8Q9JJ48 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h8Q9JJ48 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.21■□□□□ 0.67
Zc3h8Q9JJ48 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h8Q9JJ48 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Zc3h8Q9JJ48 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h8Q9JJ48 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.21■□□□□ 0.67
Zc3h8Q9JJ48 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.21■□□□□ 0.67
Zc3h8Q9JJ48 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zc3h8Q9JJ48 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Gm12922-201ENSMUST00000120626 809 ntBASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zc3h8Q9JJ48 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms